diff --git a/src/create_dummy_ped.py b/src/create_dummy_ped.py index 8c2883b5709d86fc60a040becb5984e4b82a5996..333c82543e3007a38f2e2db82cde03537bd18e9f 100644 --- a/src/create_dummy_ped.py +++ b/src/create_dummy_ped.py @@ -8,7 +8,8 @@ ml Anaconda3 conda activate quac_common # Example -python src/create_dummy_ped.py --project_path "/data/project/worthey_lab/projects/CF_CFF_PFarrell/" --outfile test.ped +PROJECT="CF_TLOAF_PFarrell" +python src/create_dummy_ped.py --project_path "/data/project/worthey_lab/projects/${PROJECT}/" --outfile "data/raw/ped/${PROJECT}.ped" """ from pathlib import Path