Explore projects

Scripts used on a cluster that demonstrate vcf file manipulation and preparation.

Uses OpenAI API to determine if a research idea is reasonable and novel for the MPOG database. Not affiliated with MPOG in any way.

A boilerplate for reproducible computational biology projects.

Download cov2 (WuHan1 strain) fasta and gff3 from NCBI, and index with BWA, STAR, etc.

First Flask Web App. Following a series of blog post by Mbithe Nzomo: https://scotch.io/tutorials/build-a-crud-web-app-with-python-and-flask-part-one