diff --git a/data_science_journal_club_checklist.md b/checklist.md similarity index 83% rename from data_science_journal_club_checklist.md rename to checklist.md index fd5aad955b55f9144ed8d3fe409d988d02b2128d..66a39731b0fa0c41534a528a07f41bf9cc21137f 100644 --- a/data_science_journal_club_checklist.md +++ b/checklist.md @@ -14,10 +14,10 @@ Steps can be performed by any Teachers and Instructors unless otherwise noted. - [ ] Add course Teachers and Instructors as needed. - Must be done by [IOR](#abbreviations) _after_ merge step is complete! Otherwise, adds may need to be redone. - Please visit [Canvas: Add/Remove User(s) SLA page](https://uabprod.service-now.com/service_portal?id=sc_cat_item&sys_id=76f97b59374a670024a67c1643990ece). -- [ ] Upload [Syllabus HTML](data_science_journal_club_syllabus.html) +- [ ] Upload [Syllabus HTML](syllabus.html) 1. Navigate to Syllabus page. 2. Switch text entry box to raw HTML mode by clicking `</>` symbol at bottom-right of box. - 3. Copy-paste [HTML](data_science_journal_club_syllabus.html) into text entry box. + 3. Copy-paste [HTML](syllabus.html) into text entry box. 4. Update Demonstration assignment links. 1. Look for the three HTML tags like `<a title="Demonstration #1" href="">`. 2. For each one, add the appropriate assignment page path, which should look like `/courses/$course_number/assignments/$assignment_number`, e.g. like `/courses/1601187/assignments/6860919`. This can be found by visiting the assignment to get the `$course_number` and `$assignment_number` values. @@ -27,15 +27,30 @@ Steps can be performed by any Teachers and Instructors unless otherwise noted. 8. **Manually verify all links by clicking them!** 9. Make a note of the Syllabus page URL for use with the Assignments page. _Not_ the Syllabus editing page! 10. Update syllabus at <https://s3.lts.rc.uab.edu/uab-rc-dsjc/syllabus.html> by manual upload. -- [ ] Set up the [Assignments HTML](data_science_journal_club_assignment.html) - 1. Update the Syllabus link in the [Assignment HTML](data_science_journal_club_assignment.html). - 1. On the first line is an HTML tag that looks like `<a title="Syllabus" href="">`. - 2. Copy-paste the Syllabus Page URL between the double quotes after `href=`. - 2. Navigate to Assignments page. - 3. Click "+ Assignment" button. - 4. Enter Assignment Name in text entry box: `Demonstration #1`. - 5. Switch text entry box to raw HTML mode by clicking `</>` symbol at bottom-right of box. - 6. Copy-paste [HTML](data_science_journal_club_assignment.html) into text entry box. +- [ ] Set up the [Syllabus Affirmation Assignment HTML](syllabus_affirmation_assignment.html) + 1. Navigate to Assignments page. + 2. Click "+ Assignment" button. + 3. Enter Assignment Name in text entry box: `Syllabus Affirmation`. + 4. Set the following field values in the remainder of the form. + - Points: `1` + - Assignment Group: `Assignments` + - Display Grade as: `Complete/Incomplete` + - Assign: + - Assign to: `Everyone` + - Due: Monday of 2nd week. + - Available from/until: blank + 5. Click "Build" button. + 6. Follow instructions at [Syllabus Affirmation Assignment](syllabus_affirmation_assignment.md). + 7. Click "Done" button. +- [ ] Set up the [Demonstration Assignment HTML](demonstration_assignment.html) + 1. Navigate to Assignments page. + 2. Click "+ Assignment" button. + 3. Enter Assignment Name in text entry box: `Demonstration #1`. + 4. Switch text entry box to raw HTML mode by clicking `</>` symbol at bottom-right of box. + 5. Copy-paste [HTML](demonstration_assignment.html) into text entry box. + 6. Update Syllabus link. + 1. On the first line is HTML tag that looks like `<a title="Syllabus" href="">`. + 2. Copy-paste Syllabus Page URL between double quotes after `href=`. 7. Switch to WYSIWYG mode: click `</>` symbol again. 8. Set the following field values in the remainder of the form. - Points: `1` @@ -101,7 +116,7 @@ Steps can be performed by any Teachers and Instructors unless otherwise noted. 2. Click `+ Announcements` button. 3. Enter Topic Title as "Welcome to the Data Science Journal Club course!" 4. Switch text entry box to raw HTML mode by clicking `</>` symbol at bottom-right of box. - 5. Copy-paste [HTML](data_science_journal_welcome_announcement.html) into text entry box. + 5. Copy-paste [HTML](welcome_announcement.html) into text entry box. 6. Switch to WYSIWYG mode: click `</>` symbol again. 7. Modify as necessary to be relevant to the current session. diff --git a/data_science_journal_club_assignment.html b/demonstration_assignment.html similarity index 100% rename from data_science_journal_club_assignment.html rename to demonstration_assignment.html diff --git a/data_science_journal_club_syllabus.html b/syllabus.html similarity index 88% rename from data_science_journal_club_syllabus.html rename to syllabus.html index fc1ac324477c537cbda2381a22ca0dfa74cc7f05..3f4234ae6afedc5f8fd6c93bb7ff991fb0d447fa 100644 --- a/data_science_journal_club_syllabus.html +++ b/syllabus.html @@ -99,12 +99,9 @@ <p>Grading is based purely on demonstrations. Three are required, and each has its own assignment within Canvas.</p> <p>The demonstration due dates progress throughout the semester:</p> <ul> - <li><a title="Demonstration #1" href="">Demonstration #1</a> is due by the 6th - Friday.</li> - <li><a title="Demonstration #2" href="">Demonstration #2</a> is due by the 10th - Friday.</li> - <li><a title="Demonstration #3" href="">Demonstration #3</a> is due by the last - Friday.</li> + <li><a title="Demonstration #1">Demonstration #1</a> is due by the 6th Friday.</li> + <li><a title="Demonstration #2">Demonstration #2</a> is due by the 10th Friday.</li> + <li><a title="Demonstration #3">Demonstration #3</a> is due by the last Friday.</li> </ul> <p>Because office hours are open to potentially hundreds of researchers outside the scope of this course, <strong>only one session can be presented per student per office hours visit.</strong> <strong><em>Please plan @@ -153,6 +150,28 @@ <p>Feel free to seek out and use other sources! If you do so, please inform us of those sources so we can curate our list and better serve future students.</p> <p> </p> +<h3>Frequently Asked Questions:</h3> +<h4>I'm completely new to data science, what are some good starting points?</h4> +<ul> + <li>To get started with general data science tools and techniques, try Kaggle Learn: <a + href="https://www.kaggle.com/learn" target="_blank" rel="noopener">https://www.kaggle.com/learn</a><a + href="https://rosalind.info/problems/locations/" target="_blank" rel="noopener"></a></li> + <li>Check out the Data Carpentries Lessons: <a href="https://datacarpentry.org/lessons/" target="_blank" + rel="noopener">https://datacarpentry.org/lessons/</a></li> + <li><a href="https://www.kaggle.com/learn" target="_blank" rel="noopener"></a>For starting bioinformatics, also try + Rosalind.info: <a href="https://rosalind.info/problems/locations/" target="_blank" + rel="noopener">https://rosalind.info/problems/locations/</a></li> +</ul> +<h4>What tools are available to make it easier to manage my projects?</h4> +<ul> + <li>We suggest using Git! Learn more at: <a href="https://swcarpentry.github.io/git-novice/" target="_blank" + rel="noopener">https://swcarpentry.github.io/git-novice/</a></li> +</ul> +<h4>Am I allowed to use my own research projects for this course?</h4> +<ul> + <li>Yes, and we encourage applying new tools and techniques! Be mindful that we can't accept any work for research + protected by IRB or using PHI/HIPAA data. Be sure to get your supervisor's approval first.</li> +</ul> <h3 id="support">Technical Support:</h3> <p>Research Computing Official Site: <a class="external" href="https://www.uab.edu/it/home/research-computing" target="_blank" rel="noopener">https://www.uab.edu/it/home/research-computing</a>.</p> diff --git a/syllabus_affirmation_assignment.md b/syllabus_affirmation_assignment.md new file mode 100644 index 0000000000000000000000000000000000000000..83fc41a096c925fe5802d2400d0c4bcb52309112 --- /dev/null +++ b/syllabus_affirmation_assignment.md @@ -0,0 +1,28 @@ +# Title + +## Instructions + +- Use the following text: + + > In a new window, please read the Syllabus, then return here to complete the affirmation. + +- On the word "Syllabus", insert a link to the syllabus page. + +## Questions + +Use the following pattern for each question. + +- Use the following question title: + + > When is the first/second/third Demonstration due? + +- Use the following question stem: + + > The date is... + +- Answers, in any order + 1. The correct date. Click the radio button for this answer! + 2. A random date during the semester + 3. Another random date during the semester + 4. One more random date during the semester +- Options: check "shuffle choices" diff --git a/data_science_journal_club_welcome_announcement.html b/welcome_announcement.html similarity index 100% rename from data_science_journal_club_welcome_announcement.html rename to welcome_announcement.html