From 93ba65c28873d0ff1da95382fc2b851296ff9b07 Mon Sep 17 00:00:00 2001
From: Matthew Defenderfer <mdefende@uab.edu>
Date: Thu, 6 Mar 2025 16:19:41 -0600
Subject: [PATCH] change to using installed PyCharm modules
---
form.yml.erb | 30 ++++++++++++++----------------
template/script.sh.erb | 8 +-------
2 files changed, 15 insertions(+), 23 deletions(-)
diff --git a/form.yml.erb b/form.yml.erb
index b11912e..19bf685 100644
--- a/form.yml.erb
+++ b/form.yml.erb
@@ -14,17 +14,17 @@
cluster: "SLURM_CLUSTER"
# Title of the app displayed in the Dashboard
-title: "PyCharmCE Singularity"
+title: "PyCharmCE"
# Description of the app displayed in the Dashboard (can use multi-line string
# and Markdown syntax)
description: |
- This app will launch a JupyterLab server on one or more cores from a given Singularity container.
+ This app will launch the PyCharm IDE in a VNC window.
# Define attribute values that aren't meant to be modified by the user within
# the Dashboard form
attributes:
- # Set the corresponding modules that need to be loaded for Jupyter to run
+ # Set the corresponding modules that need to be loaded for PyCharm to run
#
# @note It is called within the batch job as `module load <modules>` if
# defined
@@ -42,17 +42,7 @@ attributes:
value: |
# load any other modules you may need here such as CUDA
# DO NOT LOAD Anaconda3 or Singularity, these are already
- # taken care of
-
- # User needs to set the path to the container
- container_path:
- widget: text_field
- label: Path to Container File
-
- # Any extra command line arguments to pass to `singularity exec ...`
- extra_singularity_args:
- widget: text_field
- label: Extra Singularity arguments
+ # available.
bc_num_hours:
value: 1
@@ -88,6 +78,15 @@ attributes:
<%- partitions.each do |p| -%>
- [ "<%= p %>", "<%= p %>" ]
<%- end -%>
+
+ version:
+ widget: select
+ label: "PyCharm version"
+ help: "This defines the version of PyCharm you want to load."
+ options:
+ - [ "2022.3.2", "PyCharm/2022.3.2"]
+ - [ "2019.3.1", "PyCharm/2019.3.1"]
+
# All of the attributes that make up the Dashboard form (in respective order),
# and made available to the submit configuration file and the template ERB
@@ -100,8 +99,7 @@ attributes:
# Dashboard
form:
- custom_environment
- - container_path
- - extra_singularity_args
+ - version
- bc_num_hours
- bc_partition
- bc_num_gpus
diff --git a/template/script.sh.erb b/template/script.sh.erb
index f645283..54854f5 100755
--- a/template/script.sh.erb
+++ b/template/script.sh.erb
@@ -24,8 +24,6 @@ cd "${HOME}"
# Start Pycharm
#
-# export SINGULARITY_BINDPATH='/data,/scratch,/local,/share'
-
# Load Anaconda3
module load Anaconda3
@@ -36,11 +34,7 @@ module list
# Launch PyCharm
set -x
-# singularity exec --env \"DISPLAY=$DISPLAY\" -B \"/tmp/.X11-unix:/tmp/.X11-unix\" \
-# <%= context.extra_singularity_args %> \
-# <%= context.container_path %> \
-# pycharm
-module --ignore-cache load PyCharm/2022.3.2
+module load <%= context.version %>
pycharm.sh
\ No newline at end of file
--
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