From c155f8a8c3151c9175731fd253b7feb572dca5bc Mon Sep 17 00:00:00 2001
From: Matthew K Defenderfer <mdefende@uab.edu>
Date: Fri, 13 Sep 2024 23:41:30 -0500
Subject: [PATCH] remove env var declaration and craft run-mmpol command
instead
---
src/run-policy/submit-pol-job | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/src/run-policy/submit-pol-job b/src/run-policy/submit-pol-job
index 1589c24..d71f91a 100755
--- a/src/run-policy/submit-pol-job
+++ b/src/run-policy/submit-pol-job
@@ -110,8 +110,8 @@ fi
slurm_out="out/pol-%A-$(basename ${policy})-$(basename ${device}).out"
mkdir -p out
-DIR=$outdir POLICYFILE=$policy FILESYSTEM=${device} OUTFILE=${outfile} && \
-DIR=$DIR POLICYFILE=$POLICYFILE FILESYSTEM=${FILESYSTEM} OUTFILE=${OUTFILE} \
+run_mmpol_cmd="./run-mmpol.sh -o ${outdir} -f ${outfile} -P ${policy} ${device}"
+
sbatch \
-N $nodes \
-c $cores \
@@ -119,4 +119,4 @@ sbatch \
--mem-per-cpu=$mem_per_cpu \
-p $partition \
-o ${slurm_out} \
- ./run-mmpol.sh
+ "${run_mmpol_cmd}
--
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