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Commit 74c56fae authored by Min Gao's avatar Min Gao
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modified: README.md

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......@@ -4,11 +4,11 @@ Linux/Unix
Python (>= 3.7)
## Install Scanpy through conda:
The Miniconda3 package management system can be used to harmonize all of the software packages. We can install Scanpy using the conda environment.
Use the following commands to install Minicoda3
$ wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh
Use the following commands to install Miniconda3:
$ wget https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh
$ bash Miniconda3-latest-Linux-x86_64.sh
##We can create an isolated environment for Scanpy and install through the following commands:
We can create an isolated environment for Scanpy and install through the following commands:
$ conda config --add channels defaults
$ conda config --add channels bioconda
$ conda config --add channels conda-forge
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