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Commit da3338fd authored by William Warriner's avatar William Warriner
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all of it

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{
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"htmlWhitespaceSensitivity": "ignore"
}
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img/cycle.png

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img/workflow.png

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index.html
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<!DOCTYPE html> <!DOCTYPE html>
<html lang="en"> <html lang="en">
<head>
<head> <head>
<!-- metaproperties --> <!-- metaproperties -->
<meta charset="utf-8" /> <meta charset="utf-8" />
<meta <meta
name="viewport" name="viewport"
content="width=device-width, initial-scale=1.0, maximum-scale=1.0, user-scalable=no" content="width=device-width, initial-scale=1.0, maximum-scale=1.0, user-scalable=no" />
/>
<!-- css --> <!-- css -->
<link rel="stylesheet" href="reveal/reset.css" /> <link rel="stylesheet" href="reveal/reset.css" />
...@@ -15,6 +13,9 @@ ...@@ -15,6 +13,9 @@
<link rel="stylesheet" href="reveal/theme/white.css" /> <link rel="stylesheet" href="reveal/theme/white.css" />
<link rel="stylesheet" href="theme/uab-rc.css" /> <link rel="stylesheet" href="theme/uab-rc.css" />
<!-- open urls in new window -->
<base target="_blank" />
<!-- metadata --> <!-- metadata -->
<title>UAB IT Research Computing</title> <title>UAB IT Research Computing</title>
</head> </head>
...@@ -23,64 +24,170 @@ ...@@ -23,64 +24,170 @@
<div class="reveal"> <div class="reveal">
<div class="slides"> <div class="slides">
<section data-background-color="var(--uab-dragons-lair-green)"> <section data-background-color="var(--uab-dragons-lair-green)">
<h1 class="title">YOUR TITLE SHOULD GO HERE</h1> <h1 class="title">
Using Git for
<br />
Scientific Reproducibility
</h1>
<h4>Research Computing</h4> <h4>Research Computing</h4>
<h4><script> document.write(new Date().toLocaleDateString()); </script></h4> <h4>
<script>
document.write(new Date().toLocaleDateString());
</script>
</h4>
</section> </section>
<!-- SLIDES START HERE --> <!-- SLIDES START HERE -->
<!-- headers -->
<section> <section>
<h1>Outline</h1> <h1>What is Git?</h1>
<h2>Outline</h2> <ul>
<h3>Outline</h3> <li>
<h4>Outline</h4> Git is a version control tool letting you track different versions
<h5>Outline</h5> of the same files.
<h6>Outline</h6> </li>
<li>Works best with plaintext documents and code.</li>
<li>Distinct projects are kept in separate repositories.</li>
</ul>
<iframe data-src="https://git-scm.com" class="r-stretch"></iframe>
</section>
<section>
<h1>What are GitHub and GitLab?</h1>
<ul>
<li>Cloud tools enabling collaboration using Git.</li>
<li>
GitHub...
<ul>
<li>more widely used</li>
<li>owned by Microsoft</li>
<li>
cloud-hosted at
<a href="https://github.com">https://github.com</a>
</li>
<li>no campus hosting</li>
</ul>
</li>
<li>
GitLab...
<ul>
<li>more project management tools</li>
<li>privately owned</li>
<li>
cloud-hosted at
<a href="https://gitlab.com">https://gitlab.com</a>
</li>
<li>
campus-hosted at
<a href="https://gitlab.rc.uab.edu">
https://gitlab.rc.uab.edu
</a>
, maintained by Research Computing
</li>
</ul>
</li>
</ul>
</section> </section>
<!-- unordered list -->
<section> <section>
<h1>Unordered List</h1> <h1>Why use Git?</h1>
<ul>
<li>part of scientific reproducibility</li>
<li>review history of changes</li>
<li>document why changes were made</li>
</ul>
<h1>Why use GitHub and GitLab?</h1>
<ul> <ul>
<li>Item #1</li> <li>collaboration</li>
<li>Item #2</li> <li>project management</li>
<li>Item #3</li> <li>informal backup</li>
</ul> </ul>
</section> </section>
<!-- ordered list -->
<section> <section>
<h1>Ordered List</h1> <h1>Collaborative Workflow</h1>
<ol> <div class="r-stack">
<li>Item #1</li> <img
<li>Item #2</li> class="fragment current-visible fade-out"
<li>Item #3</li> data-fragment-index="0"
</ol> src="img/cycle.png"
class="stretch" />
<img
class="fragment current-visible"
data-fragment-index="1"
src="img/workflow.png"
class="stretch" />
</div>
</section>
<section>
<h1>Example</h1>
<ul>
<li>
UAB RC Documentation
<a href="https://docs.rc.uab.edu">https://docs.rc.uab.edu</a>
</li>
<li>
GitHub Repository
<a href="https://github.com/uabrc/uabrc.github.io">
https://github.com/uabrc/uabrc.github.io
</a>
</li>
</ul>
<iframe
data-src="https://docs.rc.uab.edu"
class="r-stretch"
margin-top="20px"></iframe>
</section> </section>
<!-- table -->
<section> <section>
<h1>Table</h1> <h1>How to Learn Git?</h1>
<table> <ul>
<tr> <li>
<th></th> Software Carpentry lesson:
<th>Header #2</th> <a href="https://swcarpentry.github.io/git-novice/">
<th>Header #3</th> https://swcarpentry.github.io/git-novice/
</tr> </a>
<tr> <ul>
<td>Row 1</td> <li>Great for beginners!</li>
<td>1,1</td> </ul>
<td>1,2</td> </li>
</tr> <li>
<tr> GitLab &ndash; Learn Git:
<td>Row 2</td> <a href="https://docs.gitlab.com/ee/topics/git/">
<td>2,2</td> https://docs.gitlab.com/ee/topics/git/
<td>2,3</td> </a>
</tr> </li>
</table> <li>
UAB LinkedIn Learning:
<a href="https://www.linkedin.com/learning/search?keywords=git">
https://www.linkedin.com/learning/search?keywords=git
</a>
</li>
</ul>
<h1>Documentation</h1>
<ul>
<li>
Git:
<a href="https://git-scm.com/doc">https://git-scm.com/doc</a>
</li>
<li>
GitHub:
<a href="https://docs.github.com">https://docs.github.com/en</a>
</li>
<li>
GitLab:
<a href="https://docs.gitlab.com/">https://docs.gitlab.com/</a>
(we have the free tier)
<ul></ul>
</li>
<li>
Fixing mistakes:
<a href="https://wwarriner.github.io/gitfix/">
https://wwarriner.github.io/gitfix/
</a>
</li>
</ul>
</section> </section>
<!-- SLIDES END HERE -->
</div> </div>
</div> </div>
......
script/reveal-configs.js
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......
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