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calculate-churn.sh 881 B
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#! /bin/bash
#
#SBATCH --job-name=calculate-churn
#SBATCH --ntasks=1
#SBATCH --cpus-per-task=16
#SBATCH --mem=90G
#SBATCH --partition=amperenodes-reserve
#SBATCH --time=12:00:00
#SBATCH --reservation=rc-gpfs
#SBATCH --gres=gpu:1
#SBATCH --output=out/churn-%A-%a.out
#SBATCH --error=out/churn-%A-%a.err
#SBATCH --array=1-162

module load Anaconda3
conda activate gpfs-dev

hive="/data/rc/gpfs-policy/data/gpfs-hive/data-project/"
tlds=($(find ${hive} -name "tld=*" -type d | sed -n "s/.*tld=//p"))
tld=${tlds[${SLURM_ARRAY_TASK_ID}]}

echo "TLD: ${tld}"

python << END
from pathlib import Path
from rc_gpfs.process.process import calculate_churn

hive_path = Path("${hive}")
tld = "${tld}"

acqs = hive_path.joinpath(f"tld={tld}").glob("acq=*")
acq_dates = [p.name.removeprefix("acq=") for p in acqs]

with_cuda=True

churn = calculate_churn(hive_path,tld,acq_dates,with_cuda)

END