Reorganize code to python package and add functionality for processing and visualizing policy logs

.gitignore

 data
+local-data/
 joblogs/
 slurm-*
 out/
 err/
 *.sif
-__pycache__
\ No newline at end of file
+__pycache__
+quarto*
+cufile.log
+*.html
+general-report_files
+poetry.toml
+.vscode
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create_symlinks.sh

+#!/bin/bash
+mkdir -p bin
+# Find all .py and .sh files in the src directory and its subdirectories
+find src/ -type f \( -name "*.py" -o -name "*.sh" \) | while read -r file; do
+  # Get the base name of the file
+  base=$(basename "$file")
+  # Create a symbolic link in the bin directory
+  ln -sf "../$file" "bin/$base"
+done
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pyproject.toml

+[tool.poetry]
+name = "rc-gpfs"
+version = "0.0.0"
+description = "GPFS policy aggregation and reporting"
+authors = ["Matthew Defenderfer <mdefende@uab.edu>"]
+readme = "README.md"
+license = "AFL"
+repository = "https://gitlab.rc.uab.edu/rc/gpfs-policy"
+keywords = ["GPFS", "policy", "aggregation", "reporting"]
+classifiers = [
+    "Development Status :: 4 - Beta",
+    "Programming Language :: Python :: 3",
+    "Programming Language :: Python :: 3.11",
+    "Programming Language :: Python :: 3.12"
+]
+packages = [
+    { include = "rc_gpfs", from = "src" }
+]
+
+[tool.poetry.dependencies]
+python = "^3.11"
+pandas = "^2.2.2"
+numpy = "^1.26.4"
+pyarrow = "^16.1.0"
+cudf-cu12 = { version = "^24.10", source = "rapids" }
+dask-cudf-cu12 = { version = "^24.10", source = "rapids" }
+cuml-cu12 = { version = "^24.10", source = "rapids" }
+plotly = "^5.24.1"
+nvidia-ml-py = "^12.560.30"
+
+[[tool.poetry.source]]
+name="rapids"
+url="https://pypi.nvidia.com"
+priority = "supplemental"
+
+[tool.poetry.scripts]
+gpfs-preproc = "report.cli:aggregate_gpfs_dataset"
+gpfs-report = "report.cli:report"
+
+[tool.poetry-dynamic-versioning]
+enable = true
+vcs = "git"
+pattern = "default-unprefixed"
+format = "{base}+{distance}.{commit}"
+style = "semver"
+tag-branch = "main"
+
+[build-system]
+requires = ["poetry-core>=1.0.0","poetry-dynamic-versioning"]
+build-backend = "poetry_dynamic_versioning.backend"
+

src/rc_gpfs/__init__.py

+from .compute import *
+from .process import *
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