NODDI

This should grow to be a repository of everything needed (excluding MATLAB) needed to run the NODDI toolbox in a fairly streamlined fashion

Getting Started

These instructions will get you a copy of the project up and running on your local machine for development and testing purposes. See deployment for notes on how to deploy the project on a live system.

To run, use an interactive node (ideally using 8 cores)

sinteractive --ntasks=1 --cpus-per-task=8 --mem-per-cpu=8192 --time=72:00:00 --partition=long

Then start matlab module and start matlab

module load rc/matlab/R2018a
matlab

Prerequisites

Needs matlab installed and the NODDI toolbox in the MATLAB path

Built With

• MATLAB - The scripting framework used
• NODDI - The multi-compartment model used to measure CSF and other things, a MATLAB toolbox

Authors

William S. Monroe