Commits · 33f2d70efbe4f40601c5441f746986c99e81d0fa · RC Data Science / community-containers / Alphafold3 · GitLab

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Mar 25, 2025
- Update Dockerfile · 33f2d70e
  Fortune Iriaye authored 2 months ago
  
  33f2d70e
Dec 19, 2024
- Update README.md · 6166cdc0
  Fortune Iriaye authored 5 months ago
  
  6166cdc0
Dec 16, 2024
- change CMD to ENTRYPOINT · f0bc27f5
  Matthew K Defenderfer authored 5 months ago
  
  f0bc27f5
Nov 21, 2024
- Update README.md · 1799b97f
  Fortune Iriaye authored 6 months ago
  
  1799b97f
- Update README.md · 0f186978
  Fortune Iriaye authored 6 months ago
  
  0f186978
- set dind as a service and change default image to latest docker · cd48cee5
  Matthew K Defenderfer authored 6 months ago
  
  cd48cee5
- Update .gitlab-ci.yml file · f091b893
  Fortune Iriaye authored 6 months ago
  
  f091b893
- Update Dockerfile · 19f51afb
  Fortune Iriaye authored 6 months ago
  
  19f51afb
- Delete .Dockerfile.swp · cc46977f
  Fortune Iriaye authored 6 months ago
  
  cc46977f
- Update .gitlab-ci.yml file · 9d2f6ed7
  Fortune Iriaye authored 6 months ago
  
  9d2f6ed7
- Update .gitlab-ci.yml file · 67ac69a9
  Fortune Iriaye authored 6 months ago
  
  67ac69a9
- Update Dockerfile · 9aa959ec
  Fortune Iriaye authored 6 months ago
  
  9aa959ec
- Update .gitlab-ci.yml file · 822d740f
  Fortune Iriaye authored 6 months ago
  
  822d740f
- Update .gitlab-ci.yml file · bb3b95f4
  Fortune Iriaye authored 6 months ago
  
  bb3b95f4
- Update Dockerfile · d2bd79d9
  Fortune Iriaye authored 6 months ago
  
  d2bd79d9
Nov 20, 2024
- Update .gitlab-ci.yml file · 7d5c07d2
  Fortune Iriaye authored 6 months ago
  
  7d5c07d2
- Update .gitlab-ci.yml file · 2ccde9bc
  Fortune Iriaye authored 6 months ago
  
  2ccde9bc
- Merge branch 'edit-gitlab-ci' into 'main' · f0939f61
  Fortune Iriaye authored 6 months ago
```
Made edits to gitlab-ci.yml using alphafold2

See merge request !6
```
  f0939f61
- Made edits to gitlab-ci.yml using alphafold2 · 397a5ef4
  Ubuntu authored 6 months ago
  
  397a5ef4
- Merge branch 'edit-gitlab-ci' into 'main' · d968bdec
  Fortune Iriaye authored 6 months ago
```
Made edits to gitlab-ci.yml using alphafold2 example

See merge request !5
```
  d968bdec
- Made edits to gitlab-ci.yml using alphafold2 example · ef1f432c
  Ubuntu authored 6 months ago
  
  ef1f432c
- Merge branch 'edit-gitlab-ci' into 'main' · 51c45307
  Fortune Iriaye authored 6 months ago
```
Made edits to gitlab-ci.yml

See merge request !4
```
  51c45307
- Made edits to gitlab-ci.yml · e667ff8a
  Ubuntu authored 6 months ago
  
  e667ff8a
- Merge branch 'edit-gitlab-ci' into 'main' · 5d1a3343
  Fortune Iriaye authored 6 months ago
```
Edit gitlab ci

See merge request !3
```
  5d1a3343
- :Merge branch 'main' into edit-gitlab-ci · f17319be
  Ubuntu authored 6 months ago
  
  f17319be
- Edited only Dockerfile · eac27abf
  Ubuntu authored 6 months ago
  
  eac27abf
- Merge branch 'edit-readme' into 'main' · 5371cd67
  Fortune Iriaye authored 6 months ago
```
Made changes to readme file

See merge request !2
```
  5371cd67
- Made changes to readme file · 1d69e7df
  Ubuntu authored 6 months ago
  
  1d69e7df
- Merge branch 'clone-alphafold3-github' into 'main' · 2e116019
  Fortune Iriaye authored 6 months ago
```
Cloned AlphaFold 3 repo into this one

See merge request !1
```
  2e116019
- Merge Alphafold github into main · f88b0985
  Ubuntu authored 6 months ago
  
  f88b0985
- Add Alphafold_github as a submodule · 5a106e1c
  Ubuntu authored 6 months ago
  
  5a106e1c
- Update .gitlab-ci.yml file · 5c7b9e53
  Fortune Iriaye authored 6 months ago
  
  5c7b9e53
- Initial commit · 7808d11a
  Fortune Iriaye authored 6 months ago
  
  7808d11a
- Fix setup to work with Python 3.12 · 23e3d46d
  Augustin Zidek authored 6 months ago
```
PiperOrigin-RevId: 698035568
```
  23e3d46d
- Use model dir flag for run_alphafold_test · 025701f0
  Augustin Zidek authored 6 months ago
```
PiperOrigin-RevId: 698034193
```
  025701f0
Nov 19, 2024
- Fix Singularity run commands · 65328c9c
  Augustin Zidek authored 6 months ago
```
PiperOrigin-RevId: 698024666
```
  65328c9c
- Convert Stockholm to A3M without reading the whole file into RAM · cb2133d0
  Augustin Zidek authored 6 months ago
```
PiperOrigin-RevId: 698003594
```
  cb2133d0
- Don't read more Stockholm sequences than necessary when converting to a3m · e60f750b
  Augustin Zidek authored 6 months ago
```
PiperOrigin-RevId: 697979915
```
  e60f750b
- Improve error message for flash attention implementation not supported · 35996125
  Augustin Zidek authored 6 months ago
```
PiperOrigin-RevId: 697937778
```
  35996125
- Remove unused MsaToolResult.num_hits · 7e3067b8
  Augustin Zidek authored 6 months ago
```
PiperOrigin-RevId: 697929605
```
  7e3067b8