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Cloned AlphaFold 3 repo into this one

Merged Fortune Iriaye requested to merge clone-alphafold3-github into main
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@@ -494,15 +494,15 @@ glycan to the protein residue, and all bonds that are within the glycan between
its individual chemical components.
For example, to define the following glycan composed of 4 components (CMP1,
CMP2, CMP3, CMP4) bound to an arginine in a protein chain A:
CMP2, CMP3, CMP4) bound to an asparagine in a protein chain A:
```
ALA CMP4
| |
ARG --- CMP1 --- CMP2
| |
ALA CMP3
ALA CMP4
| |
ASN ―― CMP1 ―― CMP2
| |
ALA CMP3
```
@@ -510,7 +510,7 @@ You will need to specify:
1. Protein chain A.
2. Ligand chain B with the 4 components.
3. Bonds ARG-CMP1, CMP1-CMP2, CMP2-CMP3, CMP2-CMP4.
3. Bonds ASN-CMP1, CMP1-CMP2, CMP2-CMP3, CMP2-CMP4.
## User-provided CCD
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