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Commit 766426be authored by Matthew K Defenderfer's avatar Matthew K Defenderfer
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fix spyder env name and conda run command

parent f39f55e1
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Pipeline #10978 passed with stage
in 21 minutes and 41 seconds
......@@ -8,7 +8,6 @@ ENV DEBIAN_FRONTEND=noninteractive
RUN apt-get update && \
apt-get install -y \
libgl1-mesa-glx \
libxtst6 \
less \
nano \
&& apt-get clean && \
......@@ -25,4 +24,4 @@ ADD ./envs/cellxgene.txt /tmp/cellxgene.txt
RUN conda create -y --name cellxgene --file /tmp/cellxgene.txt
SHELL ["bash"]
ENTRYPOINT [ "conda", "run", "--no-capture-output", "-n", "spyder-env", "spyder" ]
\ No newline at end of file
ENTRYPOINT [ "conda", "run", "--no-capture-output", "-n", "spyder-env", "-p", "/opt/conda/envs", "spyder" ]
\ No newline at end of file
name: spyder
name: spyder-env
channels:
- conda-forge
- defaults
......
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